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bioforensics / MicroHapulator

Tools for empirical microhaplotype calling, forensic interpretation, and simulation.
https://microhapulator.readthedocs.io/
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New command to grab hg38 #124

Closed standage closed 2 years ago

standage commented 2 years ago

MicroHapulator needs a new flag or subcommand to download and index the GRCh38 reference assembly.

https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/001/405/GCA_000001405.15_GRCh38/seqs_for_alignment_pipelines.ucsc_ids/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz

https://lh3.github.io/2017/11/13/which-human-reference-genome-to-use