Closed standage closed 5 years ago
The sequences spanning and flanking each marker are now distributed with MicroHapDB, making it possible to implement this feature in MicroHapDB, where it arguably belongs. Completed in https://github.com/bioforensics/MicroHapDB/pull/27.
There is no convenient way to view a summary of a microhaplotype marker at the moment. Although this could potentially be a feature of MicroHapDB, I think it makes more sense as part of MicroHapulator (since the reference genome is bundled with the software, and the
LocusContext
class will lend consistency across the different views). I suggest implementing this as themhpl8r marker
subcommand, the output of which could look something like this.