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YEAT: Your Everyday Assembly Tool
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Adding additional flags/arguments when assembly algorithms are called #18

Closed danejo3 closed 10 months ago

danejo3 commented 1 year ago

As we continue to explore and find the best flags/parameters for any given assembly algorithm (#2 ), we'll need to add these flags/parameters when they are called.

In #16 , a config file was introduced to YEAT. In this file, each JSON entry will contain the assembly algorithm's name and extra_args.

Currently, YEAT calls each assembly algorithm with hardly any additional flags. Depending on how we go about #15 , this may influence the way we handle the extra_args entry from the user's config file.