bioforensics / yeat

YEAT: Your Everyday Assembly Tool
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Adding metaquast as an option if reference data is avaliable #38

Open danejo3 opened 1 year ago

danejo3 commented 1 year ago

Metaquast is a quality assessment tool for meta genomics data. Like Quast, we'll want to call metaquast when doing metagenomic assembly.

Metaquast can take in reference data to assist in the final report. If not reference dataset is provided, metaquast will try to identify the genomes in the meta sample using blastn.

All info about how to use metaquast is found here.