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bioforensics / yeat

YEAT: Your Everyday Assembly Tool
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Adding metaMDBG into YEAT #59

Closed danejo3 closed 9 months ago

danejo3 commented 10 months ago

The purpose of this PR is to resolve #57 .

In this PR, the assembly algorithm metaMDBG was added into YEAT's workflow; however, this algorithm is only available for Linux OS users. If the user tries to include metaMDBG in their config file and their system is not a linux OS, YEAT will stop and notify users to look at their config file.

In addition to adding metaMDBG into the workflow, I have spent sometime cleaning up the makefile and pytests.

danejo3 commented 9 months ago

This PR is ready for review! The test suite takes a while to run!