Closed bioimageiobot closed 11 months ago
error': 'Failed to install conda environment:\n'
'channels: [defaults, conda-forge]\n'
'dependencies:\n'
'- python>=3.7,<3.8\n'
'- bioimageio.core>=0.5.0; extra == "bioimageio"\n'
'- pip\n'
"- pip: [stardist>=0.8.3, 'tensorflow>=1.[15](https://github.com/bioimage-io/collection-bioimage-io/actions/runs/6476544517/job/17585511761?pr=648#step:9:16),<2']\n"
"name: '8429[20](https://github.com/bioimage-io/collection-bioimage-io/actions/runs/6476544517/job/17585511761?pr=648#step:9:21)5'\n",
'id': 'validation_summary_tensorflow_saved_model_bundle',
'name': 'install test environment',
'status': 'failed'
I manually changed the environment file but it was automatically generated again by StarDist export function. I realised this right after clicking Publish :'(
I then specified an environment.yaml to use. A new version related to #649 should have the correct env.
This is an automatic PR created by the @bioimageiobot regarding changes to the resource item 10.5281/zenodo.8421755. The following version(s) will be added:
Please review the changes and make sure the new item or version(s) pass the following check list:
Maintainers: @qin-yu
Note: If you updated or re-uploaded another version for the current item on Zenodo, this PR won't be changed automatically. To proceed, you can do the following:
status
field asaccepted
, but change thestatus
under the current version toblocked
.Keep proposed version(s) (and this resource in general if it is new) as pending: Close this PR without merging.
Then wait for the CI on the main branch to complete. It should detect the new version(s) and create another PR for the new version(s).
Previous PRs of this resource: https://github.com/bioimage-io/collection-bioimage-io/pull/646