bioimage-io / collection-bioimage-io

(deprecated in favor of bioimage-io/collection) RDF collection for BioImage.IO
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Update StarDist-Drosophila-Melanogaster #697

Closed bioimageiobot closed 7 months ago

bioimageiobot commented 9 months ago

This is an automatic PR created by the @bioimageiobot regarding changes to the resource item 10.5281/zenodo.10406343. The following version(s) will be added:

Please review the changes and make sure the new item or version(s) pass the following check list:

Maintainers: @cfusterbarcelo

Note: If you updated or re-uploaded another version for the current item on Zenodo, this PR won't be changed automatically. To proceed, you can do the following:

  1. Block this version, but keep looking for future versions: Edit the current resource.yaml and keep the top-level status field as accepted, but change the status under the current version to blocked.
  2. Accept this version and keep looking for future versions: Merge this PR for now.
  3. Keep proposed version(s) (and this resource in general if it is new) as pending: Close this PR without merging.

    Then wait for the CI on the main branch to complete. It should detect the new version(s) and create another PR for the new version(s).

Previous PRs of this resource: none

FynnBe commented 9 months ago

This current version has an invalid conda environment file: The ; extra == "bioimageio" doesn't make sense.

esgomezm commented 8 months ago

@cfusterbarcelo can you please correct this one and update both models? (stardist_topix2pix as well) It's the environment file referred in the yaml, in the weights field. Also, see if you can update the name of the model stardist_topix2pix following the naming convection of being human readable and tailored for non-expert users (check the description).

bioimageiobot commented 7 months ago

preview-collection-json