I got an new error when running the command: java -jar /opt/biosoft/CIRI-full_v2.0/CIRI-vis_v1.4.jar -i out_merge_circRNA_detail.anno -l output_library_length.list -r zma_dna_v4.fa -min 1 -d test_outdir -o circRNA . I donot fix it. Can any one help me.
Exception in thread "main" java.lang.IndexOutOfBoundsException: Index 0 out of bounds for length 0
at java.base/jdk.internal.util.Preconditions.outOfBounds(Preconditions.java:64)
at java.base/jdk.internal.util.Preconditions.outOfBoundsCheckIndex(Preconditions.java:70)
at java.base/jdk.internal.util.Preconditions.checkIndex(Preconditions.java:248)
at java.base/java.util.Objects.checkIndex(Objects.java:372)
at java.base/java.util.ArrayList.get(ArrayList.java:459)
at sample_MIX_all_easy4.paint(sample_MIX_all_easy4.java:1278)
at CIRI_vis_test.main(CIRI_vis_test.java:457)
Hi @Alipe2021 , could you try the latest version of CIRI-vis from https://github.com/bioinfo-biols/CIRI-vis ? The executable jar file is located under the bin directory.
Hi guys,
I got an new error when running the command:
java -jar /opt/biosoft/CIRI-full_v2.0/CIRI-vis_v1.4.jar -i out_merge_circRNA_detail.anno -l output_library_length.list -r zma_dna_v4.fa -min 1 -d test_outdir -o circRNA
. I donot fix it. Can any one help me.OS: opensuse 15.2 Java version:![图片](https://user-images.githubusercontent.com/77709930/142958190-998ba35d-b463-490c-8070-307f70f7203b.png)
CIRI-vis 1.4