Dear author,
There may be a minor bug in your script that circRNA exon length has been shortened by one nt.
e.g
isoform exon structure : 1-100, 201-300
actual length: 200
yours: 198
My annotation is from GENCODE, which is 1-based format.
The column circ_len of CIRI.info shows an incorrect value, an instance is as
Hi @JinwenBioinfo , you're correct! We made a mistake when calculating the length from the isoform structure. I will fix it in the coming commit. Thanks for letting us know!
Dear author, There may be a minor bug in your script that circRNA exon length has been shortened by one nt. e.g isoform exon structure : 1-100, 201-300 actual length: 200 yours: 198
My annotation is from GENCODE, which is 1-based format. The column
circ_len
ofCIRI.info
shows an incorrect value, an instance is asBest wishes.