bioinfo-biols / CIRI-long

Circular RNA Identification for Nanopore Sequencing
https://ciri-cookbook.readthedocs.io
MIT License
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Could CIRI-long detect f-circRNAs? #6

Closed gnilihzeux closed 2 years ago

gnilihzeux commented 2 years ago

Recently, another strategy detecting circRNAs using Nanopore had published, which is [circFL-seq reveals full-length circular RNAs with rolling circular reverse transcription and nanopore sequencing].

The paper underlined the feature about f-circ, so could CIRI-long do the same ?

Thanks.

Kevinzjy commented 2 years ago

Well, although it's theoretically possible to detect f-circRNAs using our sequencing strategy, the current version of CIRI-long won't output these results. We could possibly add this feature in the future.

gnilihzeux commented 2 years ago

I See. Thank you.