bioinfo-biols / CIRIquant

circular RNA quantification tools
https://sourceforge.net/projects/ciri/files/CIRIquant
MIT License
27 stars 17 forks source link

Alignment does not end #54

Closed kendaida closed 1 year ago

kendaida commented 1 year ago

Hi thank you for developing this cool tool! I am running ~50 samples at the same time, most of them finished in a few hours but some of them were alining the reads even after three days. Some of the long taking samples finished the run after three days.

I am using paired end read fastq, the size is about 3~5Gb for each file. Happy to have any suggestions to solve this situation.