Question: Predict circRNAs using multiple tools

bioinfo-biols / CIRIquant

circular RNA quantification tools

https://sourceforge.net/projects/ciri/files/CIRIquant

MIT License

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Question: Predict circRNAs using multiple tools #60

Closed farzamani closed 7 months ago

farzamani commented 7 months ago

Hi, I have a question regarding predicting circRNAs using multiple tools (CIRI2, find_circ, DCC, etc.) using CIRIquant. How am I supposed to do that using CIRIquant --circ and --tool options? I am not sure if I can insert multiple parameters there.

Thanks!

Kevinzjy commented 7 months ago

Hi @farzamani , CIRIquant does not support specifying multiple --circ and --tool parameters at the same time. However, you could merge these results into a bed file for the --bed option.