bioinfo-biols / CIRIquant

circular RNA quantification tools
https://sourceforge.net/projects/ciri/files/CIRIquant
MIT License
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How to get the p-value from DE analysis? #62

Open Li-Chengyu opened 9 months ago

Li-Chengyu commented 9 months ago

Hi, It's a very useful tool to identify circRNAs and perform the downstream analyses. I have a question about the DE analysis outputs that CIRIquant generates. As there is no column named "p-value", do the outputs mean all the DE circRNAs under the p-value threshold which you set in the command line before? And can we get the specific p-value for each DE circRNA? Thanks very much for your reply!