bioinfo-ibms-pumc / SCSA

SCSA: cell type annotation for single-cell RNA-seq data
GNU General Public License v3.0
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This works as described #30

Open TyberiusPrime opened 1 year ago

TyberiusPrime commented 1 year ago

Hey,

I just wanted to leave some feedback, for once a bioinformatics tool that just works as described!. A rare find.

You do need an older pandas, because pandas serialization is bonkers, but other than that, the scanpy example worked on the first try.

For those having seen the light of nix, I've written a flake that locks to nixpkgs 23.05 which has the old pandas: https://github.com/IMTMarburg/flakes/tree/main/SCSA