how to create my reference database to use SCSA

bioinfo-ibms-pumc / SCSA

SCSA: cell type annotation for single-cell RNA-seq data

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how to create my reference database to use SCSA #34

Open chunyang-sea opened 3 months ago

chunyang-sea commented 3 months ago

Hi, I can't use whole.db or whole_v2.db because my data/cell types are different. Can you advise how to create a reference database from marker gene list? what is the format of whole.db? Thanks Chunyang