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bioinfo-ut / PhenotypeSeeker

Identify phenotype-specific k-mers and predict phenotype using sequenced bacterial strains
GNU General Public License v3.0
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How to correct P using FDR? #21

Open zddzxxsmile opened 2 years ago

zddzxxsmile commented 2 years ago

Thanks for your valuable pipeline. I have a question, how to correct P using FDR.

erkiaun commented 2 years ago

Hi!

The FDR correction is not currently implemented. However, all the k-mers reported have their p-values passed the Bonfferroni threshold.

Regards, Erki

On Sun, 6 Feb 2022 at 16:12, zddzxxsmile @.***> wrote:

Thanks for your valuable pipeline. I have a question, how to correct P using FDR.

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