How to make the bowtie2 index of circRNA junctions and the STAR index

tjhwangxiong commented 1 year ago

Thanks for your great tool

I hope to know how to make the bowtie2 index of circRNA junctions and the STAR index?

Thanks a lot

SREERAMIISERB commented 7 months ago

hello Xiong Wang, could you please guide me of how and from where to download the fastq.gz files for the IP and input samples in the circRIP paper

tjhwangxiong commented 7 months ago

I do not know either.

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--------------原始邮件-------------- 发件人："SREERAMIISERB @.>; 发送时间：2023年12月25日(星期一) 下午5:38 收件人："bioinfolabwhu/circRIP" @.>; 抄送："王雄 @.>;"Author @.>; 主题：Re: [bioinfolabwhu/circRIP] How to make the bowtie2 index of circRNA junctions and the STAR index (Issue #1)

hello Xiong Wang, could you please guide me of how and from where to download the fastq.gz files for the IP and input samples in the circRIP paper

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