Welcome to w2rap-contigger
WARNING: you are running the code with omp_proc_bind_false, parallel performance may suffer
--== Step 1: Reading input files ==--
Fri Dec 02 11:43:16 2022: finding input files
Fri Dec 02 11:43:16 2022: reading 2 files (which may take a while)
Fri Dec 02 13:10:28 2022: found 1 samples
Fri Dec 02 13:10:28 2022: starts = 0
Fri Dec 02 13:10:28 2022: data extraction complete, peak = 371.93 GB
1.45 hours used extracting reads
Reading input files DONE!
--== Step 2: Building first (small K) graph ==--
Fri Dec 02 13:10:28 2022: creating kmers from reads...
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
terminate called recursively
Aborted (core dumped)
w2rap-contigger -t 60 -m 800 -p w2rap -o w2rap_output -r D2005364A-WR_L01_1.cleaned.fq.gz,D2005364A-WR_L01_2.cleaned.fq.gz
Welcome to w2rap-contigger WARNING: you are running the code with omp_proc_bind_false, parallel performance may suffer --== Step 1: Reading input files ==-- Fri Dec 02 11:43:16 2022: finding input files Fri Dec 02 11:43:16 2022: reading 2 files (which may take a while)
INPUT FILES: [1a,type=frag,sample=C,lib=1,frac=1] D2005364A-WR_L01_1.cleaned.fq.gz [1b,type=frag,sample=C,lib=1,frac=1] D2005364A-WR_L01_2.cleaned.fq.gz
Fri Dec 02 13:10:28 2022: found 1 samples Fri Dec 02 13:10:28 2022: starts = 0 Fri Dec 02 13:10:28 2022: data extraction complete, peak = 371.93 GB 1.45 hours used extracting reads Reading input files DONE!
--== Step 2: Building first (small K) graph ==-- Fri Dec 02 13:10:28 2022: creating kmers from reads... terminate called after throwing an instance of 'std::bad_alloc' what(): std::bad_alloc terminate called recursively Aborted (core dumped)