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bioinfologics / w2rap

WGS (Wheat) Robust Assembly Pipeline

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kmer questions #8

Closed mictadlo closed 5 years ago

mictadlo commented 5 years ago

Hi, Do you think it would be a good idea:

to use any of khmer recipes and
to use kmergenie in order to determine -K parameter.

Thank you in advance

Michal

jonwright99 commented 5 years ago

Answered in https://github.com/bioinfologics/w2rap-contigger/issues/36