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breakseq2
BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants
BSD 2-Clause "Simplified" License
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breakseq2 does not install against custom-compiled python 3.8.1, Centos 7.
#23
jbsysadmin
opened
4 years ago
0
Creation of breakpoints file (in either GFF3 or FASTA format)
#22
moldach
opened
4 years ago
0
Fasta.py IOError, can't find 1.fa
#21
Johnnywang92
opened
5 years ago
0
how to generate breakpoint library
#20
weikai320722
opened
5 years ago
0
Could you please provide a breakpoint library for HG 38?
#19
jiangyuanluo
opened
5 years ago
7
KeyError: '1'
#18
maojn
closed
5 years ago
2
What breakpoint library should I use?
#17
jiangyuanluo
closed
6 years ago
3
breakseq2 breaks at breakseq_core
#16
burnsro
closed
6 years ago
2
OSError: [Errno 7] Argument list too long
#15
MaestSi
opened
6 years ago
7
error breakpoint file
#14
guillaume-rs
closed
6 years ago
1
VCF coordinates appear to be 0-based instead of 1-based
#13
djhshih
opened
8 years ago
0
Tolerate missing insertion sequences
#12
marghoob
closed
9 years ago
0
Versioned index
#11
marghoob
closed
9 years ago
0
Report missing GFF fields in VCF
#10
marghoob
closed
9 years ago
0
Fix final vcf reporting
#9
marghoob
closed
9 years ago
0
ERROR at preprocess_and_align step
#8
boboppie
closed
9 years ago
7
Fix junction length param
#7
marghoob
closed
9 years ago
0
Fix retcodes
#6
marghoob
closed
9 years ago
0
Add license
#5
marghoob
closed
9 years ago
0
Fix return code
#4
marghoob
closed
9 years ago
0
Add biopython to requirements.
#3
roryk
closed
9 years ago
4
Fix incorrect tag for extracting contig name
#2
marghoob
closed
9 years ago
0
Run from gff
#1
marghoob
closed
9 years ago
0