bioinform / neusomatic

NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection
Other
168 stars 50 forks source link

Fail in installing step #83

Open baoyl818 opened 2 years ago

baoyl818 commented 2 years ago

Hi, friend

when I install the software, it errors as this :

Scanning dependencies of target seqan
[  5%] Creating directories for 'seqan'
[ 10%] Performing download step (git clone) for 'seqan'
Cloning into 'seqan'...
error: RPC failed; result=18, HTTP code = 200
fatal: The remote end hung up unexpectedly
fatal: early EOF
fatal: index-pack failed
Cloning into 'seqan'...
fatal: unable to access 'https://github.com/seqan/seqan.git/': Encountered end of file
Cloning into 'seqan'...
error: RPC failed; result=18, HTTP code = 200
fatal: The remote end hung up unexpectedly
fatal: early EOF
fatal: index-pack failed
-- Had to git clone more than once:
      3 times.
CMake Error at /../neusomatic/third_party/seqan/tmp/seqan-gitclone.cmake:66 (message):
Failed to clone repository: 'https://github.com/seqan/seqan.git'

make[2]: *** [/../neusomatic/third_party/seqan/src/seqan-stamp/seqan-download] Error 1
make[1]: *** [CMakeFiles/seqan.dir/all] Error 2
make: *** [all] Error 2

Does it mean that my cluster can not connnect to the 'seqan' github ? I have already installed the depened softwares and python packages.

Thanks