Hello!
I entered the path ~/Software/AsmVar-master/src/AsmvarDetect
and type make
the error occurs like this:
g++ -lz -o ASV_VariantDetector main.o utility.o Variant.o VarUnit.o gzstream.o AGEaligner.o vcf.o Region.o
gzstream.o: In function gzstreambuf::open(char const*, int)': gzstream.cpp:(.text+0x10b): undefined reference togzopen'
gzstream.o: In function gzstreambuf::close()': gzstream.cpp:(.text+0x1a3): undefined reference togzclose'
gzstream.o: In function gzstreambuf::underflow()': gzstream.cpp:(.text+0x2e2): undefined reference togzread'
gzstream.o: In function gzstreambuf::flush_buffer()': gzstream.cpp:(.text+0x3a6): undefined reference togzwrite'
collect2: error: ld returned 1 exit status
Makefile:9: recipe for target 'ASV_VariantDetector' failed
make: *** [ASV_VariantDetector] Error 1
Hello! I entered the path ~/Software/AsmVar-master/src/AsmvarDetect and type make the error occurs like this: g++ -lz -o ASV_VariantDetector main.o utility.o Variant.o VarUnit.o gzstream.o AGEaligner.o vcf.o Region.o gzstream.o: In function
gzstreambuf::open(char const*, int)': gzstream.cpp:(.text+0x10b): undefined reference togzopen' gzstream.o: In functiongzstreambuf::close()': gzstream.cpp:(.text+0x1a3): undefined reference togzclose' gzstream.o: In functiongzstreambuf::underflow()': gzstream.cpp:(.text+0x2e2): undefined reference togzread' gzstream.o: In functiongzstreambuf::flush_buffer()': gzstream.cpp:(.text+0x3a6): undefined reference togzwrite' collect2: error: ld returned 1 exit status Makefile:9: recipe for target 'ASV_VariantDetector' failed make: *** [ASV_VariantDetector] Error 1so what's worry ? and what I should do ? Thanks