genotyping error: intercluster_diploid_kmer_stats.at(sample_idx).at(bias _idx).front().getCount() == 0

Hi When I run the BayesTyper v1.4, I got this error. Could anyone please help me to fix this? Thanks

[14/02/2019 06:13:18] You are using BayesTyper (v1.4)

[14/02/2019 06:13:18] Seeding pseudo-random number generator with 1550146398 ... [14/02/2019 06:13:18] Setting the kmer size to 55 ...

[14/02/2019 06:13:18] Parsed information for 1 sample(s)

[14/02/2019 06:13:18] Parsing reference genome ... [14/02/2019 06:14:49] Parsed 24 reference genome chromosomes(s) (3095677412 nucl eotides)

[14/02/2019 06:14:49] Parsing decoy sequence(s) ... [14/02/2019 06:15:03] Parsed 62 decoy sequence(s) (41777093 nucleotides)

[14/02/2019 06:15:14] Maximum resident set size: 3.37096 Gb

[14/02/2019 06:15:14] Parsing variant clusters ... [14/02/2019 06:16:04] Parsed 1829850 variant clusters (5052955 variants)

[14/02/2019 06:16:12] Parsing parameter kmers ... [14/02/2019 06:16:24] Parsed 1000000 kmers

[14/02/2019 06:16:24] Maximum resident set size: 25.0474 Gb

[14/02/2019 06:16:24] Counting kmers in variant cluster paths ... [14/02/2019 06:29:30] Counting kmers in inter-cluster regions and decoy sequence (s) ...

[14/02/2019 06:34:57] Parsing KMC table containing 8070384125 kmers for sample U DN765115 ...

[14/02/2019 07:48:11] Classifying kmers in variant cluster paths ... [14/02/2019 07:50:42] Out of 211574032 kmers:

    - 180492874 have a match to a single variant cluster
    - 17803661 have a match to single variant cluster group and multiple var

iant clusters

    - 1011777 have match to at least one variant cluster and has match to a

decoy sequence (not used for inference)

3551 have match to at least one variant cluster and has a maximum hapl oid multiplicity higher than 127 (not used for inference)
10721402 have matches to multiple variant cluster groups within or acr oss inference units (not used for inference)
1540767 have no match to a variant cluster (includes parameter kmers)

[14/02/2019 07:50:42] Maximum resident set size: 27.0064 Gb

[14/02/2019 07:50:42] Estimating genomic haploid kmer count distribution(s) from parameter kmers ...

bayesTyper: /isdata/kroghgrp/jasi/bayesTyper/code/releases/v1.4_static/BayesType r-1.4/src/bayesTyper/CountDistribution.cpp:92: void CountDistribution::setGenomi cCountDistributions(const std::vector<std::vector<std::vector > >&, c onst string&): Assertion `intercluster_diploid_kmer_stats.at(sample_idx).at(bias _idx).front().getCount() == 0' failed.

Best, Youhuang

bioinformatics-centre / BayesTyper

genotyping error: intercluster_diploid_kmer_stats.at(sample_idx).at(bias _idx).front().getCount() == 0 #12