Feature Request : Hisat2

bioinformatics-centre / bayesembler

A Bayesian method for doing transcriptome assembly from RNA-seq data

MIT License

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Feature Request : Hisat2 #17

Open sanyalab opened 5 years ago

sanyalab commented 5 years ago

Hi Lasse,

This is similar to the request for STAR alignment support in bayesassembler. Is there anyway to give the program, HISAT2 alignments instead of Tophat2. Hisat2 as you know is the successor to Tophat

Thanks Abhijit

sanyalab commented 5 years ago

Writing to find out if there is a way to convert a HISAT2 alignment to a TopHat2 alignment. Cuz then the problem will be solved.