Open AlexSongh opened 2 years ago
Hm I don't know. Maybe the file got corrupted during download.
btw, check the README to see how much memory you need for building the database.
I have enough memory in the storage account. Which I have 3 TB storage. But when I download it, it showed broken pipe. Then I changed to a slurm scripts. Do you know how to solve this issue?
I was thinking about RAM, not storage. Maybe it's better for you to download the index from the web server, see https://kaiju.binf.ku.dk/server
Thank you!
Hi I have a problem when downloading the euk_nr database using the slurm scripts I have installed a kaiju conda environment, and run the following codes
My HPC settings were
SBATCH --ntasks-per-node=8
SBATCH --mem-per-cpu=16GB
SBATCH --nodes=1
SBATCH --cpus-per-task=1
my codes are as follows:
I have following issues, do you know what's wrong and how to solve this?
Thanks!