Open Serenatumino opened 5 years ago
Hi Serena,
Thank you for your interest in Zanardi. Regarding your problem, it seems that you started a python terminal sessions instead of invoking Zanardi as a program. Maybe you have pasted a wrong command line from manual. Could you try to type manually this command:
python Zanardi.py --download=beagle3,beagle4,PLINK,ADMIXTURE
(see that there are only two --
, while in your command you have placed ----
and some hidden characters). However, I saw that fcGENE has moved its package to a zip
file instead of tar.zg
and you can't to install fcGENE
properly.
@malbianco , @filippob, @nicolazzie, could you check, please?
I've installed Zanardi following the suggestions of zanardi's manual. I have tried to install the required programs (plink, beagle3, beagle4, fcgene and admixture) using the following command:
python Zanardi.py -‐-‐download=beagle3,beagle4,fcGENE,PLINK,ADMIXTURE
but i have the following problems: Python 2.7.15rc1 (default, Nov 12 2018, 14:31:15) [GCC 7.3.0] on linux2 Type "help", "copyright", "credits" or "license" for more information.
How can I fix these problems?
Thanks in advance for your help Regards
Serena