Combine chromosomes with plot stacked runs

bioinformatics-ptp / detectRUNS

detectRuns: a R Package for Runs of Homozygosity and Runs of Heterozygosity

8 stars 4 forks source link

Combine chromosomes with plot stacked runs #47

Open tori-rudolph opened 3 months ago

tori-rudolph commented 3 months ago

I am plotting runs of homozygosity and am using plot_StackedRuns. Is there any way to get 1 plot with all chromosomes instead of separate plots for each chromosome?

bunop commented 2 months ago

Hi @tori-rudolph,

From what I can see in the plot_StackedRuns function, it doesn’t seem to be possible at the moment. Would a plot with all chromosomes be too complex to interpret? I suggest starting with the plot_StackedRuns code and experimenting to see if you can create something useful. If you succeed, feel free to contribute your improvements to the package.