Due to the plan that we want to further extend the functionality of Brownie, Brownie can be called by different commands at the beginning of arguments line. Currently error correction is the main functionality which is accessible by ErrorCorrection command. It can also produce the de bruijn graph without any modification via GraphConstruction (stage 3). Or it can clean the graph ( stage 4 ) with GraphCorrection. The Assembly command do nothing currently. Brownie runs with Error correction procedure as a default if you don't specify the command to be consistent with our previous scripts.
Due to the plan that we want to further extend the functionality of Brownie, Brownie can be called by different commands at the beginning of arguments line. Currently error correction is the main functionality which is accessible by ErrorCorrection command. It can also produce the de bruijn graph without any modification via GraphConstruction (stage 3). Or it can clean the graph ( stage 4 ) with GraphCorrection. The Assembly command do nothing currently. Brownie runs with Error correction procedure as a default if you don't specify the command to be consistent with our previous scripts.