When using bioio.plugins.dump() the list of plugins cannot be reported due to a KeyError: 'author'. I believe this issue is also effecting the determine_plugin method.
Reproduction
Created a python 3.10 virtual env and pip install bioio bioio-ome-tiff. You need to install one of the plugins to see this bug but any of them seem to reporduce.
import bioio
bioio.plugins.dump_plugins()
Output
---------------------------------------------------------------------------
KeyError Traceback (most recent call last)
/allen/aics/microscopy/brian_whitney/repos/bioio/test.py in line 3
[1](file:///allen/aics/microscopy/brian_whitney/repos/bioio/test.py?line=0) import bioio
[2](file:///allen/aics/microscopy/brian_whitney/repos/bioio/test.py?line=1) from bioio_ome_tiff import Reader
----> [3](file:///allen/aics/microscopy/brian_whitney/repos/bioio/test.py?line=2) bioio.plugins.dump_plugins()
File /allen/aics/microscopy/brian_whitney/repos/bioio/bioio/plugins.py:255, in dump_plugins()
[253](file:///allen/aics/microscopy/brian_whitney/repos/bioio/bioio/plugins.py?line=252) dist = ep.dist
[254](file:///allen/aics/microscopy/brian_whitney/repos/bioio/bioio/plugins.py?line=253) if dist is not None:
--> [255](file:///allen/aics/microscopy/brian_whitney/repos/bioio/bioio/plugins.py?line=254) print(f" Author : {dist.metadata['author']}")
[256](file:///allen/aics/microscopy/brian_whitney/repos/bioio/bioio/plugins.py?line=255) print(f" Version : {dist.version}")
[257](file:///allen/aics/microscopy/brian_whitney/repos/bioio/bioio/plugins.py?line=256) print(f" License : {dist.metadata['license']}")
File [~/.pyenv/versions/bioio-import-bug/lib/python3.10/site-packages/importlib_metadata/_adapters.py:54](https://vscode-remote+ssh-002dremote-002bdev-002daics-002dbwp-002d001-002ecorp-002ealleninstitute-002eorg.vscode-resource.vscode-cdn.net/allen/aics/microscopy/brian_whitney/repos/bioio/~/.pyenv/versions/bioio-import-bug/lib/python3.10/site-packages/importlib_metadata/_adapters.py:54), in Message.__getitem__(self, item)
[52](file:///home/brian.whitney/.pyenv/versions/bioio-import-bug/lib/python3.10/site-packages/importlib_metadata/_adapters.py?line=51) res = super().__getitem__(item)
[53](file:///home/brian.whitney/.pyenv/versions/bioio-import-bug/lib/python3.10/site-packages/importlib_metadata/_adapters.py?line=52) if res is None:
---> [54](file:///home/brian.whitney/.pyenv/versions/bioio-import-bug/lib/python3.10/site-packages/importlib_metadata/_adapters.py?line=53) raise KeyError(item)
[55](file:///home/brian.whitney/.pyenv/versions/bioio-import-bug/lib/python3.10/site-packages/importlib_metadata/_adapters.py?line=54) return res
KeyError: 'author'
Describe the Bug
When using bioio.plugins.dump() the list of plugins cannot be reported due to a
KeyError: 'author'. I believe this issue is also effecting the determine_plugin method.Reproduction
Created a python 3.10 virtual env and
pip install bioio bioio-ome-tiff. You need to install one of the plugins to see this bug but any of them seem to reporduce.Output
Environment
Python 3.10 Installs:
pip install bioio bioio-ome-tiff