image embedding widget is lacking

[guimby]

Image Analytics version

0.1.15

Orange version

3.8.0

Expected behavior

image embedding widget can be see and used

Actual behavior

image embedding widget can't be find from the left menu nor with a search from a new link

Steps to reproduce the behavior

Additional info (worksheets, data, screenshots, ...)

[ajdapretnar]

@guimby Thanks for reporting this. Could you please also specify how you installed Orange and add-on? Is it a Miniconda version of Orange? Or standard one? Did you install the add-on via Options - Add-ons?

[PrimozGodec]

@guimby If you installed add-on via Options - Add-ons, can you check if Install add-ons with conda is checked in Options - Settings - Add-ons.

[f-rumblefish]

Dear all:

I have the same problem of missing the "image embedding" widget under Orange3 3.8.0 and Orange3-ImageAnalytics 0.1.15 on Windows 10.

Several months ago, I had installed Anaconda on my desktop. Orange was inside the Anaconda and Image Analytsics 0.1.12 (with "image embedding") was fine. This week I notice that the "image embedding" widget is gone (while I am not sure if my Anaconda config has any changes). Updating Image Analytics from Options/Add-ons (with and without checking add-ons with conda) will result in failure of "pip -m install --upgrade --no-deps Orange3-ImageAnalytics existed with non zero status."

So, I manualy download Image Analytics from this site, run "python set.up install" and launch "python -m Orange.canvas", both from Anaconda Prompt. Now, Image Analytics is 0.1.15 but missing "Image Embedding".

[PrimozGodec]

I still cannot reproduce this bug. As you described all your errors happen when using pip. Can you check Install add-ons with conda property and try to install again since new Conda builds are available? After that please confirm whether this bug is still present.

[PrimozGodec]

Closing due to inactivity. You are welcome to reopen it if the bug still present.

[umendi]

Can this issue be reopened? I am experiencing the same here:

MacOS 10.9.5 I updated Orange from 3.5 to current 3.13 (due to the add-ons issue solved on Apr.23rd) by downloading the DMG package and replacing the old version.

Due to a previously solved python compatibility issue I had because of my MacOS version, I executed the following command: /Applications/Orange3.app/Contents/MacOS/pip install PyQt5==5.8.2

Opened Orange succesfully Loaded all Add-ons succesfully Installed Image Analytics 0.2.0 successfully (options, add-ons Install add-ons with conda checked)

Only Import Images, Image Viewer and Image Grid widgets appear under the Image Analytics section

I have no other add-on installed.

[PrimozGodec]

@umendi Thank you for reporting the issue.

Can you please execute following command:

/Applications/Orange3.app/Contents/MacOS/pip freeze

and copy the output here to see if there is an issue with dependencies.

[umendi]

Thanks for the reply. I will copy two results:

1) running the command as described (version 9.0.1, it recommended upgrading at the end) 2) running the command after upgrading the pip version

1) This is the result:

Last login: Fri May  4 00:08:34 on console
apples-MacBook-Pro:~ apple$ /Applications/Orange3.app/Contents/MacOS/pip freeze
AnyQt==0.0.8
attrs==17.4.0
beautifulsoup4==4.6.0
biopython==1.71
boto==2.48.0
boto3==1.7.11
botocore==1.10.11
Bottleneck==1.2.0
brotlipy==0.7.0
bz2file==0.98
CacheControl==0.12.4
certifi==2018.4.16
cffi==1.11.5
chardet==3.0.4
CommonMark==0.7.3
docutils==0.13.1
docx2txt==0.7
future==0.16.0
gensim==3.4.0
h2==2.6.2
hpack==3.0.0
hyperframe==3.2.0
hypertemp==0.8.0
idna==2.6
jmespath==0.9.3
joblib==0.11
keyring==10.3.1
keyrings.alt==2.2
lockfile==0.12.2
lxml==4.2.1
more-itertools==4.1.0
msgpack-python==0.5.6
nltk==3.2.5
numpy==1.12.1
oauthlib==2.0.7
odfpy==1.3.6
Orange3==3.13.0
Orange3-Educational==0.1.7
Orange3-ImageAnalytics==0.2.0
Orange3-Text==0.3.0
pdfminer3k==1.3.1
Pillow==5.1.0
pluggy==0.6.0
ply==3.11
py==1.5.3
pycparser==2.18
PyQt5==5.8.2
pyqtgraph==0.10.0
PySocks==1.6.8
pytest==3.5.1
python-dateutil==2.7.2
requests==2.18.4
requests-oauthlib==0.8.0
rfc3986==1.1.0
s3transfer==0.1.13
scikit-learn==0.18.2
scipy==0.19.1
serverfiles==0.2.1
setuptools-git==1.2
simhash==1.9.0
sip==4.19.3
six==1.11.0
smart-open==1.5.7
tweepy==3.6.0
typing==3.6.4
urllib3==1.22
validate-email==1.3
wikipedia==1.4.0
xlrd==1.0.0
You are using pip version 9.0.1, however version 10.0.1 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.

2) After successfully installing the newer version:

apples-MacBook-Pro:MacOS apple$ /Applications/Orange3.app/Contents/MacOS/pip freeze
AnyQt==0.0.8
attrs==17.4.0
beautifulsoup4==4.6.0
biopython==1.71
boto==2.48.0
boto3==1.7.11
botocore==1.10.11
Bottleneck==1.2.0
brotlipy==0.7.0
bz2file==0.98
CacheControl==0.12.4
certifi==2018.4.16
cffi==1.11.5
chardet==3.0.4
CommonMark==0.7.3
docutils==0.13.1
docx2txt==0.7
future==0.16.0
gensim==3.4.0
h2==2.6.2
hpack==3.0.0
hyperframe==3.2.0
hypertemp==0.8.0
idna==2.6
jmespath==0.9.3
joblib==0.11
keyring==10.3.1
keyrings.alt==2.2
lockfile==0.12.2
lxml==4.2.1
more-itertools==4.1.0
msgpack-python==0.5.6
nltk==3.2.5
numpy==1.12.1
oauthlib==2.0.7
odfpy==1.3.6
Orange3==3.13.0
Orange3-Educational==0.1.7
Orange3-ImageAnalytics==0.2.0
Orange3-Text==0.3.0
pdfminer3k==1.3.1
Pillow==5.1.0
pluggy==0.6.0
ply==3.11
py==1.5.3
pycparser==2.18
PyQt5==5.8.2
pyqtgraph==0.10.0
PySocks==1.6.8
pytest==3.5.1
python-dateutil==2.7.2
requests==2.18.4
requests-oauthlib==0.8.0
rfc3986==1.1.0
s3transfer==0.1.13
scikit-learn==0.18.2
scipy==0.19.1
serverfiles==0.2.1
setuptools-git==1.2
simhash==1.9.0
sip==4.19.3
six==1.11.0
smart-open==1.5.7
tweepy==3.6.0
typing==3.6.4
urllib3==1.22
validate-email==1.3
wikipedia==1.4.0
xlrd==1.0.0
apples-MacBook-Pro:MacOS apple$ 

After this I opened Orange3.13, uninstalled Image Analytics, restarted the program, installed Image Analytics (with Install add-ons with conda checked), restarted Orange3.13 and still the same issue: no image embedding widget available:

[joaoalves12]

Iam facing the same problem too by downloading the DMG package. MacOS 10.11.6 Orange 3.13 Image Analytics 0.2.0

[PrimozGodec]

@umendi and @joaoalves12: Since I still can not reproduce the error I ask you if you can please run

/Applications/Orange3.app/Contents/MacOS/Orange -l 4

from the terminal and report the output you get in the command line when Orange is set up here. It should show us the reason for missing widget.

[umendi]

Thanks for your reply and follow up @PrimozGodec

I executed the command and it opened Orange. The output in the terminal I got is as follows:

Last login: Fri May 11 11:11:02 on ttys000
apples-MacBook-Pro:~ apple$ /Applications/Orange3.app/Contents/MacOS/Orange -l 4
Setting up Canvas main window.
'CanvasScene(objectName='', ...)' intitialized.
Setting registry 'None on 'CanvasScene(objectName='', ...)'.
Scheme node properties sync (changed: False)
'CanvasScene(objectName='', ...)' cleared.
'CanvasScene(objectName='', ...)' intitialized.
Setting registry 'None on 'CanvasScene(objectName='', ...)'.
Setting scheme '<Orange.canvas.scheme.widgetsscheme.WidgetsScheme object at 0x111a989d8>' on 'CanvasScene(objectName='', ...)'
Stack transition start ()
Stack transition finished ()
Dock transition finished (new width 640)
Dock transition started.
Loading widget registry cache ('/Users/apple/Library/Caches/Orange/3.13.0/canvas/registry-cache.pck').
Ignoring '/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/Orange/widgets/data/contexthandlers.py'.
Ignoring '/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/Orange/widgets/visualize/owscatterplotgraph.py'.
Ignoring '/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/Orange/widgets/visualize/owtreeviewer2d.py'.
Ignoring '/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/Orange/widgets/visualize/pythagorastreeviewer.py'.
Ignoring '/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/Orange/widgets/evaluate/contexthandlers.py'.
Ignoring '/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/Orange/widgets/evaluate/utils.py'.
[nltk_data] Downloading package wordnet to
[nltk_data]     /Users/apple/Library/Application
[nltk_data]     Support/Orange/nltk_data...
[nltk_data]   Package wordnet is already up-to-date!
[nltk_data] Downloading package stopwords to
[nltk_data]     /Users/apple/Library/Application
[nltk_data]     Support/Orange/nltk_data...
[nltk_data]   Package stopwords is already up-to-date!
[nltk_data] Downloading package punkt to
[nltk_data]     /Users/apple/Library/Application
[nltk_data]     Support/Orange/nltk_data...
[nltk_data]   Package punkt is already up-to-date!
[nltk_data] Downloading package opinion_lexicon to
[nltk_data]     /Users/apple/Library/Application
[nltk_data]     Support/Orange/nltk_data...
[nltk_data]   Package opinion_lexicon is already up-to-date!
[nltk_data] Downloading package vader_lexicon to
[nltk_data]     /Users/apple/Library/Application
[nltk_data]     Support/Orange/nltk_data...
[nltk_data]   Package vader_lexicon is already up-to-date!
[nltk_data] Downloading package averaged_perceptron_tagger to
[nltk_data]     /Users/apple/Library/Application
[nltk_data]     Support/Orange/nltk_data...
[nltk_data]   Package averaged_perceptron_tagger is already up-to-
[nltk_data]       date!
[nltk_data] Downloading package maxent_treebank_pos_tagger to
[nltk_data]     /Users/apple/Library/Application
[nltk_data]     Support/Orange/nltk_data...
Error while importing 'orangecontrib.imageanalytics.widgets.owimageembedding'. The widget will not be shown.
Traceback (most recent call last):
  File "/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/Orange/canvas/registry/discovery.py", line 261, in iter_widget_descriptions
    module = asmodule(name)
  File "/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/Orange/canvas/registry/discovery.py", line 491, in asmodule
    return __import__(module, fromlist=[""])
  File "/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/orangecontrib/imageanalytics/widgets/owimageembedding.py", line 21, in <module>
    from orangecontrib.imageanalytics.image_embedder import ImageEmbedder
  File "/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/orangecontrib/imageanalytics/image_embedder.py", line 19, in <module>
    from PIL import ImageFile
  File "/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/PIL/ImageFile.py", line 30, in <module>
    from . import Image
  File "/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/PIL/Image.py", line 60, in <module>
    from . import _imaging as core
ImportError: dlopen(/Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/PIL/_imaging.cpython-36m-darwin.so, 2): Symbol not found: _clock_gettime
  Referenced from: /Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/PIL/.dylibs/liblzma.5.dylib
  Expected in: /usr/lib/libSystem.B.dylib
 in /Applications/Orange3.app/Contents/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/PIL/.dylibs/liblzma.5.dylib
[nltk_data]   Package maxent_treebank_pos_tagger is already up-to-
[nltk_data]       date!
Saving widget registry cache with 107 entries ('/Users/apple/Library/Caches/Orange/3.13.0/canvas/registry-cache.pck').
'set_global_registry()' - setting registry.
Setting registry '<Orange.canvas.registry.qt.QtWidgetRegistry object at 0x111abeb88> on 'CanvasScene(objectName='', ...)'.
Invalid replacement fields {'DEVELOP_ROOT'}
Created <class 'Orange.canvas.help.provider.HtmlIndexProvider'> provider for Orange3-ImageAnalytics 0.2.0
Invalid replacement fields {'DEVELOP_ROOT'}
Created <class 'Orange.canvas.help.provider.HtmlIndexProvider'> provider for Orange3 3.13.0
Invalid replacement fields {'DEVELOP_ROOT'}
Created <class 'Orange.canvas.help.provider.HtmlIndexProvider'> provider for Orange3-Educational 0.1.7
Invalid replacement fields {'DEVELOP_ROOT'}
Created <class 'Orange.canvas.help.provider.HtmlIndexProvider'> provider for Orange3-Text 0.3.0

[PrimozGodec]

@umendi it seems that there is an issue with the newest version of Pillow package. Can you just downgrade the version and let me know if it works for you:

/Applications/Orange3.app/Contents/MacOS/pip install Pillow==5.0.0

Thank you for your help

[umendi]

It seems that you nailed it. I successfully downgraded the Pillow package as instructed and after I opened Orange (no need to reinstall anything else) all Image Analytics widgets appeared and worked as expected.

Thanks a lot @PrimozGodec

[PrimozGodec]

@umendi thank you for your help. The issue is now fixed in this pull request https://github.com/biolab/orange3-imageanalytics/pull/106

[joaoalves12]

Well done @PrimozGodec! Thank you

[raybg]

I am still getting this issue in 3.23.1 Orange Version and Image Analytics - 0.5.3. Since the issue was reported 2 yrs back, i hope it should run just fine along with a simple add-on. Using it via Anaconda Navigator

[ajdapretnar]

Orange is now in version 3.27. Also, did you follow the instructions for installing on Anaconda? https://orange.biolab.si/download/#windows