[ENH] Preprocess: Add dropout-based gene selection

biolab / orange3-single-cell

🍊🔬 Orange add-on for gene expression of single cell data

https://singlecell.biolab.si/

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[ENH] Preprocess: Add dropout-based gene selection #352

Closed VesnaT closed 5 years ago

VesnaT commented 5 years ago

Issue

Implements preprocessing part of #348

Description of changes

Includes

[X] Code changes
[X] Tests
[ ] Documentation

JakaKokosar commented 5 years ago

@VesnaT I have enabled CI from Forks again (It was disabled for some reason). Next commit should trigger CI :)

pavlin-policar commented 5 years ago

@VesnaT Could you trigger a CI build so we can see the tests pass. Then I'll merge since this works as expected.

pavlin-policar commented 5 years ago

The reason the tests are failing is due to an old version of the Orange-Bioinformatics addon. I ran into the same issue yesterday on my local machine and pulling down master fixed the problem for me. Probably something @JakaKokosar should look at.

pavlin-policar commented 5 years ago

I will merge this since it works well on my local machine and half the tests pass. Where the tests fail, they are unrelated to the code here. I've seen them on my local machine before and this was a result of an old version of the bioinformatics addon.