biolab / orange3-single-cell

🍊🔬 Orange add-on for gene expression of single cell data
https://singlecell.biolab.si/
Other
17 stars 25 forks source link

Coloring in OWdotMatrix #357

Open JakaKokosar opened 5 years ago

JakaKokosar commented 5 years ago

Also, and this may not belong in this PR, but would be an improvement, maybe coloring the dots according to their mean expression would make sense. Something like what scanpy does. If nothing else, it would look prettier.

image

Scanpy-s dot plot is slightly different: the size of the dot indicates in what fraction of the cells the gene is experessed in and the color indicates the mean gene expression.

Originally posted by @pavlin-policar in https://github.com/biolab/orange3-single-cell/pull/354#issuecomment-526951127