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biolink / biolink-model

Schema and generated objects for biolink data model and upper ontology
https://biolink.github.io/biolink-model/
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Generated Python/Pydantic Models as Package? #1496

Open riyavsinha opened 6 months ago

riyavsinha commented 6 months ago

Question: I see that the LinkML generators have been used to generate Python and Pydantic dataclasses, but I'm unclear as to whether these have been published as a pip installable package, or whether we are supposed to copy the file into our individual projects?

It would be great if it was a package so that we can receive updates as they are published to the BioLink Model / if there was a section on this in the Working with BioLink docs!

riyavsinha commented 6 months ago

Ah I see that biolink-model is a published package, amazing! Would maybe be helpful to have documentation for that in that page still!