Sample names can't end in an underscore

biomedicalinformaticsgroup / Sargasso

Sargasso disambiguates mixed-species high-throughput sequencing data.

http://biomedicalinformaticsgroup.github.io/Sargasso/

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Sample names can't end in an underscore #112

Open lweasel opened 5 months ago

lweasel commented 5 months ago

This breaks the filtering step, where we are using "___" as a separator for block files. We could either change this separator to something more obscure, or warn when sample names end in underscore.

cc @hxin

hxin commented 5 months ago

adding a warning or a sample name check at the beginning might be a quick fix? can also change '___' as I don't think there will be any backwards-compatible issue on this.