Pipeline description - I think we need a page describing in more detail (more than the example usage page, anyway) what is happening at each stage of the pipeline. i.e. writing Makefile, making or linking STAR indices, mapping reads etc.
Support scripts - briefly describing the other scripts in the bin directory (beyond the main species_separator script.
lweasel
commented
8 years ago
Two sections left to do:
Pipeline description - I think we need a page describing in more detail (more than the example usage page, anyway) what is happening at each stage of the pipeline. i.e. writing Makefile, making or linking STAR indices, mapping reads etc. Support scripts - briefly describing the other scripts in the bin directory (beyond the main
species_separatorscript.Skeleton files are in place for both.