Issue using networklevel()

kminach commented 3 years ago

I tried to use networklevel function to produce network indices for a non-integer matrix, but unfortunately I 've always received the same error message:"Error in ifelse(H2_max >= H2_max.improved, H2_max, H2_max.improved) : object 'H2_max' not found". I retried using different non-integer matrices, I tried using instead the H2_fun() but I kept receiving the same error no matter if H2_integer was set to FALSE or TRUE. What can I do to resolve this issue? Thank you in advance.

cdormann commented 3 years ago

Which version of bipartite did you use? Can you try and install from github? We have fixed this bug there, but haven't resubmitted to CRAN yet. Please let me know if the problem still occurs with the most recent github version. Many thanks!

On 5. Jan 2021, at 13:09, kminach notifications@github.com wrote:

I tried to use networklevel function to produce network indices for a non-integer matrix, but unfortunately I 've always received the same error message:"Error in ifelse(H2_max >= H2_max.improved, H2_max, H2_max.improved) : object 'H2_max' not found". I retried using different non-integer matrices, I tried using instead the H2_fun() but I kept receiving the same error no matter if H2_integer was set to FALSE or TRUE. What can I do to resolve this issue? Thank you in advance.

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— — — — — — Carsten Dormann

Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg

Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de

kminach commented 3 years ago

I use the latest update of bipartite on CRAN repository. I will install bipartite through github and I will inform you if the issue persists.

Please consider to update CRAN, especially for helping new bipartite users like me: I spent much time to configure that the problem was not in my data, and I found by pure luck your github repository.

Nonetheless, I am grateful for your work with bipartite, which is very helpful in pollination network analysis.

Best regards,

Kostas

Αιγινιτη 2, 38446 Βόλος

Μαγνησία Ελλάδα

6977217044

2421085679

k.minachilis@aegean.gr

Skype:kminachilis

Από: cdormann notifications@github.com Eστάλη: Τρίτη, 5 Ιανουαρίου 2021, 14:14 Προς: biometry/bipartite Κοιν.: kminach; Author Θέμα: Re: [biometry/bipartite] Issue using networklevel() (#13)

Which version of bipartite did you use? Can you try and install from github? We have fixed this bug there, but haven't resubmitted to CRAN yet. Please let me know if the problem still occurs with the most recent github version. Many thanks!

On 5. Jan 2021, at 13:09, kminach notifications@github.com wrote:

I tried to use networklevel function to produce network indices for a non-integer matrix, but unfortunately I 've always received the same error message:"Error in ifelse(H2_max >= H2_max.improved, H2_max, H2_max.improved) : object 'H2_max' not found". I retried using different non-integer matrices, I tried using instead the H2_fun() but I kept receiving the same error no matter if H2_integer was set to FALSE or TRUE. What can I do to resolve this issue? Thank you in advance.

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/biometry/bipartite/issues/13, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABZGVIVUPPZZ2GEFD35OE23SYL6QHANCNFSM4VU7R2OA.

— — — — — — Carsten Dormann

Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg

Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de

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cdormann commented 3 years ago

Hi Kostas, yes, will do: it's on my new year's resolution list ;-) Carsten

On 5. Jan 2021, at 13:45, kminach notifications@github.com wrote:

I use the latest update of bipartite on CRAN repository. I will install bipartite through github and I will inform you if the issue persists.

Please consider to update CRAN, especially for helping new bipartite users like me: I spent much time to configure that the problem was not in my data, and I found by pure luck your github repository.

Nonetheless, I am grateful for your work with bipartite, which is very helpful in pollination network analysis.

Best regards,

Kostas

Αιγινιτη 2, 38446 Βόλος

Μαγνησία Ελλάδα

6977217044

2421085679

k.minachilis@aegean.gr mailto:k.minachilis@aegean.gr

Skype:kminachilis

Από: cdormann <notifications@github.com mailto:notifications@github.com> Eστάλη: Τρίτη, 5 Ιανουαρίου 2021, 14:14 Προς: biometry/bipartite Κοιν.: kminach; Author Θέμα: Re: [biometry/bipartite] Issue using networklevel() (#13)

Which version of bipartite did you use? Can you try and install from github? We have fixed this bug there, but haven't resubmitted to CRAN yet. Please let me know if the problem still occurs with the most recent github version. Many thanks!

On 5. Jan 2021, at 13:09, kminach <notifications@github.com mailto:notifications@github.com> wrote:

I tried to use networklevel function to produce network indices for a non-integer matrix, but unfortunately I 've always received the same error message:"Error in ifelse(H2_max >= H2_max.improved, H2_max, H2_max.improved) : object 'H2_max' not found". I retried using different non-integer matrices, I tried using instead the H2_fun() but I kept receiving the same error no matter if H2_integer was set to FALSE or TRUE. What can I do to resolve this issue? Thank you in advance.

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <https://github.com/biometry/bipartite/issues/13 https://github.com/biometry/bipartite/issues/13>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABZGVIVUPPZZ2GEFD35OE23SYL6QHANCNFSM4VU7R2OA https://github.com/notifications/unsubscribe-auth/ABZGVIVUPPZZ2GEFD35OE23SYL6QHANCNFSM4VU7R2OA>.

— — — — — — Carsten Dormann

Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg

Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de mailto:carsten.dormann@biom.uni-freiburg.de

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub<https://github.com/biometry/bipartite/issues/13#issuecomment-754599551 https://github.com/biometry/bipartite/issues/13#issuecomment-754599551>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/ASLPSD67T7XDRSNRRPSV233SYL7DJANCNFSM4VU7R2OA https://github.com/notifications/unsubscribe-auth/ASLPSD67T7XDRSNRRPSV233SYL7DJANCNFSM4VU7R2OA>.

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— — — — — — Carsten Dormann

Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg

Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de

kminach commented 3 years ago

Hi Carsten,

As you proposed, I installed bipartite's latest version from Github, and everything worked perfectly!

I am looking forward to see this version (2.16) in CRAN.

Thank you very much for your help.

Best whishes,

Kostas

cdormann commented 3 years ago

Hi Kostas, bipartite 2.16 is now on its way to CRAN, according to an email I received today. Give it another day and it should be there. Carsten

On 5. Jan 2021, at 18:29, kminach notifications@github.com wrote:

Hi Carsten,

As you proposed, I installed bipartite's latest version from Github, and everything worked perfectly!

I am looking forward to see this version (2.16) in CRAN.

Thank you very much for your help.

Best whishes,

Kostas

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/biometry/bipartite/issues/13#issuecomment-754781405, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABZGVIRZFW3HWY5VFYWVOBTSYNEAXANCNFSM4VU7R2OA.

— — — — — — Carsten Dormann

Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg

Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de

kminach commented 3 years ago

Good morning Carsten,

Thank you for being so kind to inform me.

Best regards,

Kostas

From: cdormann notifications@github.com Sent: Monday, February 8, 2021 9:08 AM To: biometry/bipartite bipartite@noreply.github.com Cc: kminach kminachilis@yahoo.com; State change state_change@noreply.github.com Subject: Re: [biometry/bipartite] Issue using networklevel() (#13)

Hi Kostas, bipartite 2.16 is now on its way to CRAN, according to an email I received today. Give it another day and it should be there. Carsten

On 5. Jan 2021, at 18:29, kminach <notifications@github.com mailto:notifications@github.com > wrote:

Hi Carsten,

As you proposed, I installed bipartite's latest version from Github, and everything worked perfectly!

I am looking forward to see this version (2.16) in CRAN.

Thank you very much for your help.

Best whishes,

Kostas

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/biometry/bipartite/issues/13#issuecomment-754781405, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABZGVIRZFW3HWY5VFYWVOBTSYNEAXANCNFSM4VU7R2OA.

— — — — — — Carsten Dormann

Professor of Biometry and Environmental System Analysis Faculty of Environment and Natural Resources University of Freiburg Tennenbacher Str. 4 79106 Freiburg

Tel.: 0049 (0)761 203-3750 Fax.: 0049 (0)761 203 3751 Email: carsten.dormann@biom.uni-freiburg.de mailto:carsten.dormann@biom.uni-freiburg.de

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biometry / bipartite

Issue using networklevel() #13