ERROR: id is missing - Githubissues

biona001 / GhostKnockoffGWAS

Knockoff-based analysis of GWAS summary statistics data

MIT License

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ERROR: id is missing #26

Closed biona001 closed 5 months ago

biona001 commented 5 months ago

On the data here: http://faculty.washington.edu/browning/beagle/test.08Jun17.d8b.vcf.gz

I get an error with solveblock: id is missing. The issue is caused by missing SNP name for one of the records. A simple fix is to return . for such SNPs.