It will also need to handle multiple output types and how to set up validators for each one.
(Also I just made up that context thing - but maybe some way to pass current sample through tasks in a multiple input pipeline? in any way, it is always a little awkward hard coding output filenames in tasks - could have done sample.vcf for example)
This means to be able to pass a custom file validator on a per task basis, something like:
It will also need to handle multiple output types and how to set up validators for each one.
(Also I just made up that
context
thing - but maybe some way to pass current sample through tasks in a multiple input pipeline? in any way, it is always a little awkward hard coding output filenames in tasks - could have donesample.vcf
for example)