Adds a new example pipeline and edits existing example pipeline

[tiagofilipe12]

This PR adds a new example pipeline intended do document an easy to use tutorial with simple NGS tools. Also it adds some changes to the existing variant calling pipeline by adding changing the size of the download size of reads to a smaller one, reducing the time to download reads as well as the download size itself.

[codecov-io]

Codecov Report

Merging #53 into master will not change coverage. The diff coverage is n/a.

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  Hits          650      650           
  Misses        156      156

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[thejmazz]

I think the tutorial should use require('bionode-watermill') instead of require('../../../'). It would then need a little bit more instructions before to do something like:

mkdir watermill-tutorial
cd watermill-tutorial
npm init
npm install --save bionode-watermill

or maybe

git clone tutorialRepoOrBranch

[thejmazz]

Oh OK i see you have another "how to use in your project" part. Hmm ok, I'm not sure if ../../../ is going to be confusing to people new to node, but its probably not such a big deal.

[tiagofilipe12]

For now, i think the best pratice for the tutorial would be to require('bionode-watermill') instead of the require('../../..'). Therefore, to make it less confusing, for the user, maybe the best way is to create a new repo that the user just have to clone in order to make the tutorial. Because it might be confusing where to create the new directory, since if you make the new diretory inside the bionode-watermill folder it won't work. So, for this PR I will just leave the new example pipeline and the changes in the previous pipeline, to reduce the download size from NCBI. The rest of the tutorial I will create a new repo with specific instructions on how to do it.

[tiagofilipe12]

I have removed the tutorials and created a new repo for the tutorial. So, here I just left the new pipeline example a minor change to .gitignore and some minor fixes to the variant-calling-filtered.