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bioperl / bioperl-live-redmine

Legacy tickets migrated from the OBF Redmine issue tracker: http://redmine.open-bio.org
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genbank2gff3.pl error when running on multiple input files #117

Open cjfields opened 9 years ago

cjfields commented 9 years ago

Author Name: Adam Witney (Adam Witney) Original Redmine Issue: 3274, https://redmine.open-bio.org/issues/3274 Original Date: 2011-07-29 Original Assignee: Bioperl Guts

When running genbank2gff3 in this way:

genbank2gff3.pl *.gbk

the first file works ok, but subsequent files contain all the previous files’ features. This seems to be because two variables are not being reset between files. The attached patch fixes it for me

cjfields commented 9 years ago

Original Redmine Comment Author Name: Adam Witney Original Date: 2011-07-29T14:56:21Z

looks like a few other variables need to be reset as well. See attached patch