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Legacy tickets migrated from the OBF Redmine issue tracker: http://redmine.open-bio.org
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Consider interfacing with TABIX for feature file indexing and lookup for bed, gff, vcf format files. #94

Open cjfields opened 8 years ago

cjfields commented 8 years ago

Author Name: Jason Stajich (@hyphaltip) Original Redmine Issue: 3179, https://redmine.open-bio.org/issues/3179 Original Date: 2011-02-24 Original Assignee: Bioperl Guts

Consider interfacing with TABIX for feature file indexing and lookup for bed, gff, vcf format files. See http://samtools.sourceforge.net/tabix.shtml

cjfields commented 8 years ago

Original Redmine Comment Author Name: Chris Fields Original Date: 2011-02-25T20:39:49Z

It does have a perl XS-based interface, so worth exploring.