Closed cmungall closed 3 years ago
Hi Chris, thanks for the feedback. I just updated the default provider in 336ebd6 based on your suggestion. I'm not sure why it resolves this way. Unfortunately, it doesn't send a 404 error code so the tests that check that all of the providers are working never failed on this one. Is there anything else I should do to resolve this one?
Thanks! There are broader questions re INSDC vs partner dbs but these are covered in other tickets so I will close
Related:
108 INSDC vs partner-database specificity for samples
bioproject:PRJNA594403
should be a valid CURIEBut if I resolve https://bioregistry.io/bioproject:PRJNA594403
it goes to http://trace.ddbj.nig.ac.jp/BPSearch/bioproject?acc=PRJNA594403 which says "no project"
(same for identifiers.org or n2t)
I don't understand why it's trying to resolve to DDBJ, the project wasn't even registered there. See this handy guide for hieroglyphics of the INSDC IDs: https://ena-docs.readthedocs.io/en/latest/submit/general-guide/accessions.html
I don't know what is up with DDBJ, do we have a contact there?
I suggest resolving INSDC IDs using EBI or NCBI just now. E.g. this works:
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA594403