Closed cmrn-rhi closed 9 months ago
bgyori
commented
9 months ago Hello @cmrn-rhi thanks for this suggestion! I believe this resource is already covered under https://bioregistry.io/registry/ncbigene, could you check to confirm if that's the same resource you meant?
cthoyt
commented
9 months ago Based on the homepage, I believe these are the same. @cmrn-rhi what we can do is add additional synonyms to the record in case you are getting data that is labeled with nihgeneid or geneid in it
cmrn-rhi
commented
9 months ago Great! Yes, I agree these are referring to the same database. Sorry I missed it - I was just searching up the prefixes I had come across in the wild.
I think adding nihgeneid as synonym would definitely be helpful as it has come up several times for me. I personally find geneid is a bit ambiguous.., but I've also seen it used (example) so I guess it does make sense to have as a backup synonym.
cthoyt
commented
9 months ago
Prefix
geneid OR nihgeneid
Name
National Library of Medicine Gene ID
Homepage
https://www.ncbi.nlm.nih.gov/gene/
Repository
bioregistry
Description
Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
License
No response
Example Local Unique Identifier
43740574
Regular Expression Pattern for Local Unique Identifier
No response
URI Format String
No response
Wikidata Property
No response
Contributor Name
Rhiannon Cameron
Contributor GitHub
cmrn-rhi
Contributor ORCiD
0000-0002-9578-0788
Contact Name
No response
Contact ORCiD
No response
Contact GitHub
No response
Contact Email
No response
Additional Comments
No response