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biopragmatics / pyobo

📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures

https://pyobo.readthedocs.io

MIT License

59 stars 13 forks source link

Closed cthoyt closed 3 years ago

cthoyt commented 4 years ago

These are sources besides Identifiers.org, OBO Foundry, and the OLS that have names of namespaces and URLs at which they resolve.

Name	URL
Prefix Commons	https://github.com/prefixcommons/prefixes/blob/master/registry.yaml
uGene	https://github.com/ugeneunipro/ugene/blob/master/data/DBXRefRegistry.txt
NCBI	http://www.ncbi.nlm.nih.gov/genbank/collab/db_xref

[ ] What about wikidata? Make a query that grabs all databases and their format URL

cthoyt commented 3 years ago