Apply new KISAO terms for algorithms and parameters

[jonrkarr]

• [x] Replace KISAO_0000088 --> KISAO_0000560 new KISAO id for LSODA/LSODAR
• [x] Replace KISAO_0000483 --> KISAO_0000559 new KISAO id for initial step size
• [x] Replace KISAO_0000231 --> KISAO_0000561 new KISAO id for hybrid-runge-kutta method
• [x] Replace KISAO_0000231 --> KISAO_0000562 new KISAO id for hybrid-lsoda method
• [x] Replace KISAO_0000231 --> KISAO_0000563 new KISAO id for hybrid-rk45 method
• [x] Replace KISAO_0000036 --> KISAO_0000566 new KISAO id for Stochastic second order Runge-Kutta Method
• [x] Replace KISAO_0000243 --> KISAO_0000567 new KISAO id for force physical correctness parameter
• [x] Replace KISAO_0000242 --> KISAO_0000565 new KISAO id for Absolute tolerance for root finding

[jonrkarr]

Update in dev-kisao branch.

• [ ] Can merge once the new terms are incorporated into KISAO.

[jonrkarr]

Done