biosimulators / Biosimulators_utils

Utilities for building standardized command-line interfaces for biosimulation software packages
https://docs.biosimulators.org/Biosimulators_utils
MIT License
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Use tolerances even when changing simulation algorithm. #130

Open luciansmith opened 1 year ago

luciansmith commented 1 year ago

If a SED-ML file describes the use of (say) LSODA with certain tolerances, it will not use those tolerances when using a simulator that uses CVODE.

This is great when the described tolerances are less strict than the defaults for the simulator, but not great when the tolerances are more strict. The algorithm should check if the new tolerances are stricter, and, if so, apply them.