issues
search
biosinodx
/
SCcaller
Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data
GNU Affero General Public License v3.0
34
stars
14
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Could I use the bulk DNA WES data of the same sample as a bulk reference?
#14
MinS1
opened
4 years ago
0
Hi,Xiao DongI heven't the corresponding bulk WGS data of the single cell WGS data. Could I
#13
MinS1
closed
4 years ago
0
AD field
#12
tamaraprieto
opened
4 years ago
0
Fixed missing closing bracket in the filter header
#11
imilas
closed
4 years ago
0
PL field in VCF output
#10
amkozlov
opened
5 years ago
6
sccaller_v2.0.0.py: When choosing dbsnp, --bulk bulk_bamfile is required.
#9
linkmonica
closed
4 years ago
2
What does "varreads" mean in the reason.txt file after run reasoning_v1.1.py?
#8
MinS1
closed
5 years ago
2
What does "varreads" mean in the reason.txt file after run reasoning_v1.0.py?
#7
MinS1
closed
5 years ago
0
NameError with script reasoning_v1.1.py
#6
Goatofmountain
closed
5 years ago
1
Did you mean v1.21 or v1.2.1
#5
epruesse
closed
5 years ago
7
Could it be applied in single cell RNAseq data?
#4
x811zou
closed
5 years ago
6
variant allele fraction for homo-alt genotype is always 1?
#3
noushinquazi
closed
5 years ago
23
Error when running reasoning_v1.0.py
#2
Jonathanyu2014
closed
6 years ago
5
Can SCcaller output VCF file apart from bed file?
#1
Jonathanyu2014
closed
6 years ago
1