biothings / mygene.info

MyGene.info: A BioThings API for gene annotations
http://mygene.info
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All uniprot.Swiss-Prot are missing #140

Closed leexgh closed 9 months ago

leexgh commented 9 months ago

All uniprot.Swiss-Prot are missing in the response. For example from your documentation: https://docs.mygene.info/en/v3/doc/annotation_service.html, go to https://mygene.info/v3/gene/1017?fields=uniprot, it should have "Swiss-Prot": "P24941" like the screenshot below from the documentation.

image

But now in the response the "Swiss-Prot" field is missing:

image

Same problem happens to all other genes like https://mygene.info/v3/gene/367?fields=uniprot and https://mygene.info/v3/gene/120?fields=uniprot

newgene commented 9 months ago

@leexgh We saw this issue yesterday too from a recent Uniprot update, a fix will be out today (if the process goes smoothly). Will update here when it's live.

jal347 commented 9 months ago

@leexgh We have the fix out now! Let me know if you have any other issues.

leexgh commented 9 months ago

@jal347 @newgene Thank you!

leexgh commented 8 months ago

@newgene @jal347 Thanks for fixing this, but gene AR (entrez ID 367) doesn't have uniprot information anymore, do you know the reason? https://mygene.info/v3/gene/367?fields=uniprot