search

biothings / mygene.info

MyGene.info: A BioThings API for gene annotations
http://mygene.info
Other
113 stars 20 forks source link

Some uniprot.Swiss-Prot are not available #141

Open leexgh opened 8 months ago

leexgh commented 8 months ago

Uniprot.Swiss-Prot for some genes are not available after the recent update. For example gene AR(entrez ID 367) doesn't have uniprot information anymore https://mygene.info/v3/gene/367?fields=uniprot, it should return P10275 in the response. This is the link to uniprot: https://www.uniprot.org/uniprotkb/P10275/entry

newgene commented 8 months ago

@leexgh we checked, the root cause here is UniProt no longer provides the mapping from P10275 to NCBIGene 367 any more. Not sure if that's intended or an issue on their end.

You can see the difference from these two records:

https://www.uniprot.org/uniprotkb/P24941/entry (contains "GeneID: 1017", also linked to NCBI Gene page)

v.s.

https://www.uniprot.org/uniprotkb/P10275/entry (does not contains "GeneID: 367" any more)