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biothings / mygene.info

MyGene.info: A BioThings API for gene annotations
http://mygene.info
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UMLS CUIs for genes #18

Closed mmayers12 closed 6 years ago

mmayers12 commented 6 years ago

Is there any way they can be added? Right now, getting some kind of a map from EntrezGeneID to UMLS CUI (or vice versa) is an incredibly convoluted process.

Here is an example of the gene FOXP3. I can get the CUI for a single gene from here, but I have a list of thousands of genes for which I need to translate IDs, making this inefficient.

It looks like data for UMLS CUIs could be available for download here.

veleritas commented 6 years ago

UMLS CUIs have now been added to production. This issue can be closed.

andrewsu commented 6 years ago

Completed by @veleritas in https://github.com/biothings/mygene.info/commit/15cc71dd8fcf6978514f9b340cb808c569a1e861